EnhancerDB
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  3. rs55833508[chr17:70361709]
Enhancers that have rs55833508[chr17:70361709]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs55833508[chr17:70361709]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70361694 70361709 FOXP1 JASPAR yes 55778206
chr17 70361695 70361710 FOXP1 JASPAR yes 55778207
chr17 70361695 70361716 IRF1 JASPAR yes 55778208
chr17 70361696 70361711 FOXP1 JASPAR yes 55778209
chr17 70361699 70361714 STAT2 JASPAR yes 55778210
chr17 70361708 70361721 SMAD2 JASPAR yes 55778211
Genes associated with rs55833508[chr17:70361709], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More