EnhancerDB
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  3. rs558347549[chr1:9956680]
Enhancers that have rs558347549[chr1:9956680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9956449 9968797 enh11490
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs558347549[chr1:9956680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9956671 9956681 RORA JASPAR yes 26690299
chr1 9956672 9956683 ESRRA JASPAR yes 26690300
chr1 9956672 9956683 ESRRB JASPAR yes 26690301
chr1 9956672 9956685 NR2F1 JASPAR yes 26690302
chr1 9956674 9956682 NR4A2 JASPAR yes 26690303
chr1 9956674 9956692 RARA JASPAR yes 26690304
chr1 9956676 9956680 ESR1 TRANSFAC yes 26690305
Genes associated with rs558347549[chr1:9956680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More