EnhancerDB
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  3. rs558352668[chr17:75338090]
Enhancers that have rs558352668[chr17:75338090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558352668[chr17:75338090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75337932 75339236 ZNF274 GTRD no Bone Marrow (K562) 21790193
chr17 75337932 75339236 ZNF274 GTRD no Bone Marrow (K562) 108298427
chr17 75337948 75339290 ZNF274 GTRD no Blood (GM12878) 21790194
chr17 75337948 75339290 ZNF274 GTRD no Blood (GM12878) 108298428
chr17 75338004 75339745 ZNF274 GTRD no Blood (GM12878) 21790195
chr17 75338004 75339745 ZNF274 GTRD no Blood (GM12878) 108298429
chr17 75338021 75339137 ZNF274 GTRD no Blood (GM12878) 21790196
chr17 75338021 75339137 ZNF274 GTRD no Blood (GM12878) 108298430
chr17 75338033 75339204 ZNF274 GTRD no Blood (GM12878) 21790197
chr17 75338033 75339204 ZNF274 GTRD no Blood (GM12878) 108298431
chr17 75338034 75339205 ZNF274 GTRD no Blood (GM12878) 21790198
chr17 75338034 75339205 ZNF274 GTRD no Blood (GM12878) 108298432
chr17 75338038 75339053 ZNF143 GTRD no Epithelial (MCF-7) 21790199
chr17 75338038 75339053 ZNF143 GTRD no Epithelial (MCF-7) 108298433
chr17 75338053 75339189 ZNF274 GTRD no Blood (GM12878) 21790200
chr17 75338053 75339189 ZNF274 GTRD no Blood (GM12878) 108298434
chr17 75338090 75338100 SP1 JASPAR yes 56069537
Genes associated with rs558352668[chr17:75338090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More