EnhancerDB
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Enhancers that have rs558401985[chr12:122228064]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr12 122227826 122228273 vista15192
VISTA
Transcript factors that have rs558401985[chr12:122228064]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 21579357
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065474
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065475
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065476
chr12 122224162 122228135 ZNF143 GTRD no Epithelial (MCF-7) 108065477
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 21579424
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065568
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065569
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065570
chr12 122225140 122228686 ZBTB33 GTRD no Brain (SK-N-SH) 108065571
chr12 122225423 122228631 ZBTB33 GTRD no Brain (SK-N-SH) 21579455
chr12 122225423 122228631 ZBTB33 GTRD no Brain (SK-N-SH) 108065607
chr12 122225423 122228631 ZBTB33 GTRD no Brain (SK-N-SH) 108065608
chr12 122225423 122228631 ZBTB33 GTRD no Brain (SK-N-SH) 108065609
chr12 122227036 122228767 POLR2A UCSC Txn Factor no Conserved 108065615
chr12 122227036 122228767 POLR2A UCSC Txn Factor no Conserved 108065616
chr12 122227036 122228767 POLR2A UCSC Txn Factor no Conserved 108065617
chr12 122227643 122228163 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579466
chr12 122227643 122228163 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065626
chr12 122227673 122228083 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579467
chr12 122227673 122228083 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065627
chr12 122227693 122228140 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579468
chr12 122227693 122228140 RUNX3 UCSC Txn Factor no Conserved 108065628
chr12 122227693 122228140 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065629
chr12 122227701 122228081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579469
chr12 122227701 122228081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065630
chr12 122227721 122228157 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579471
chr12 122227721 122228157 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065632
chr12 122227749 122228169 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579472
chr12 122227749 122228169 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065633
chr12 122227776 122228096 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579474
chr12 122227776 122228096 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065635
chr12 122227779 122228099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579476
chr12 122227779 122228099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065637
chr12 122227784 122228304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579477
chr12 122227784 122228304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065638
chr12 122227794 122228134 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579478
chr12 122227794 122228134 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065639
chr12 122227799 122228696 ZBTB33 GTRD no Brain (SK-N-SH) 21579481
chr12 122227799 122228696 ZBTB33 GTRD no Brain (SK-N-SH) 108065642
chr12 122227799 122228696 ZBTB33 GTRD no Brain (SK-N-SH) 108065643
chr12 122227800 122228320 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579482
chr12 122227800 122228320 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065644
chr12 122227835 122228335 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579483
chr12 122227835 122228335 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065645
chr12 122227856 122228662 ZBTB33 GTRD no Brain (SK-N-SH) 21579484
chr12 122227856 122228662 ZBTB33 GTRD no Brain (SK-N-SH) 108065646
chr12 122227856 122228662 ZBTB33 GTRD no Brain (SK-N-SH) 108065647
chr12 122227873 122228149 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579485
chr12 122227873 122228149 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065648
chr12 122227879 122228767 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579486
chr12 122227879 122228767 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065649
chr12 122227879 122228767 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065650
chr12 122227916 122228643 ZBTB33 GTRD no Brain (SK-N-SH) 21579488
chr12 122227916 122228643 ZBTB33 GTRD no Brain (SK-N-SH) 108065652
chr12 122227916 122228643 ZBTB33 GTRD no Brain (SK-N-SH) 108065653
chr12 122227944 122228204 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21579489
chr12 122227944 122228204 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108065654
chr12 122227954 122228717 ZBTB33 GTRD no Brain (SK-N-SH) 21579490
chr12 122227954 122228717 ZBTB33 GTRD no Brain (SK-N-SH) 108065655
chr12 122227954 122228717 ZBTB33 GTRD no Brain (SK-N-SH) 108065656
chr12 122227974 122228602 ZBTB33 GTRD no Brain (SK-N-SH) 21579491
chr12 122227974 122228602 ZBTB33 GTRD no Brain (SK-N-SH) 108065657
chr12 122227974 122228602 ZBTB33 GTRD no Brain (SK-N-SH) 108065658
chr12 122228002 122228623 ZBTB33 GTRD no Brain (SK-N-SH) 21579492
chr12 122228002 122228623 ZBTB33 GTRD no Brain (SK-N-SH) 108065659
chr12 122228002 122228623 ZBTB33 GTRD no Brain (SK-N-SH) 108065660
chr12 122228033 122228609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579493
chr12 122228033 122228609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065661
chr12 122228033 122228609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065662
Genes associated with rs558401985[chr12:122228064], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More