EnhancerDB
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  3. rs558407534[chr2:204436546]
Enhancers that have rs558407534[chr2:204436546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs558407534[chr2:204436546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204436535 204436546 PHOX2A JASPAR yes 80240539
chr2 204436535 204436546 PROP1 JASPAR yes 80240540
chr2 204436542 204436554 POU2F1 JASPAR yes 80240542
chr2 204436542 204436556 POU1F1 JASPAR yes 80240543
chr2 204436543 204436555 POU3F1 JASPAR yes 80240544
chr2 204436543 204436555 POU3F2 JASPAR yes 80240545
chr2 204436543 204436556 POU2F2 JASPAR yes 80240546
Genes associated with rs558407534[chr2:204436546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More