EnhancerDB
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  3. rs558415822[chr12:49597825]
Enhancers that have rs558415822[chr12:49597825]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49590445 49597955 enh2325
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Uterus Thymus Heart
Transcript factors that have rs558415822[chr12:49597825]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49597811 49597825 POU4F1 JASPAR yes 120764098
chr12 49597812 49597825 DUXA JASPAR yes 120764099
chr12 49597816 49597826 ALX3 JASPAR yes 120764105
chr12 49597816 49597826 GSX1 JASPAR yes 120764106
chr12 49597816 49597826 GSX2 JASPAR yes 120764107
chr12 49597816 49597826 LHX6 JASPAR yes 120764108
chr12 49597816 49597826 MIXL1 JASPAR yes 120764109
chr12 49597816 49597826 MNX1 JASPAR yes 120764110
chr12 49597816 49597826 NOTO JASPAR yes 120764111
chr12 49597816 49597826 POU6F1 JASPAR yes 120764112
chr12 49597816 49597826 RAX JASPAR yes 120764113
chr12 49597817 49597825 ISX JASPAR yes 120764114
chr12 49597817 49597825 LMX1A JASPAR yes 120764115
chr12 49597817 49597825 LMX1B JASPAR yes 120764116
chr12 49597817 49597825 NKX6-1 JASPAR yes 120764117
chr12 49597817 49597825 NKX6-2 JASPAR yes 120764118
chr12 49597817 49597825 PRRX1 JASPAR yes 120764119
chr12 49597817 49597825 RAX2 JASPAR yes 120764120
chr12 49597817 49597825 SHOX JASPAR yes 120764121
chr12 49597817 49597825 UNCX JASPAR yes 120764122
chr12 49597817 49597825 VAX1 JASPAR yes 120764123
chr12 49597817 49597831 POU1F1 JASPAR yes 120764124
chr12 49597817 49597832 MEF2C JASPAR yes 120764125
chr12 49597818 49597829 PROP1 JASPAR yes 120764126
chr12 49597818 49597831 POU3F3 JASPAR yes 120764127
chr12 49597818 49597833 MEF2A JASPAR yes 120764128
Genes associated with rs558415822[chr12:49597825], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More