EnhancerDB
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  3. rs558452160[chr17:39930564]
Enhancers that have rs558452160[chr17:39930564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39926525 39940665 enh17154
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Lung Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs558452160[chr17:39930564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39930554 39930567 ZBTB18 JASPAR yes 54274712
chr17 39930556 39930566 NEUROG2 JASPAR yes 54274713
chr17 39930556 39930568 TAL1 JASPAR yes 54274714
Genes associated with rs558452160[chr17:39930564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More