EnhancerDB
  1. Home
  2. SNP
  3. rs558461660[chr1:27452264]
Enhancers that have rs558461660[chr1:27452264]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27433689 27453155 enh170
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558461660[chr1:27452264]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27452254 27452269 MEF2A JASPAR yes 27679392
chr1 27452255 27452270 MEF2C JASPAR yes 27679393
chr1 27452256 27452268 MEF2A JASPAR yes 27679394
chr1 27452256 27452268 MEF2B JASPAR yes 27679395
chr1 27452256 27452268 MEF2D JASPAR yes 27679396
Genes associated with rs558461660[chr1:27452264], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More