EnhancerDB
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  3. rs558533942[chr7:130628016]
Enhancers that have rs558533942[chr7:130628016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 130592905 130648631 enh10037
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558533942[chr7:130628016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 130628005 130628024 RFX2 JASPAR yes 18041140
chr7 130628009 130628025 RFX2 JASPAR yes 18041141
chr7 130628009 130628025 RFX3 JASPAR yes 18041142
chr7 130628009 130628025 RFX4 JASPAR yes 18041143
chr7 130628009 130628025 RFX5 JASPAR yes 18041144
chr7 130628010 130628029 RFX2 JASPAR yes 18041145
Genes associated with rs558533942[chr7:130628016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More