EnhancerDB
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  3. rs558563811[chr6:13378634]
Enhancers that have rs558563811[chr6:13378634]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13358871 13387475 enh8960
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Heart
Transcript factors that have rs558563811[chr6:13378634]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13378628 13378643 HNF4G JASPAR yes 100022752
chr6 13378628 13378643 NR2C2 JASPAR yes 100022753
chr6 13378629 13378643 NR2F1 JASPAR yes 100022754
chr6 13378629 13378644 HNF4A JASPAR yes 100022755
chr6 13378631 13378635 LFA1 TRANSFAC yes 100022756
Genes associated with rs558563811[chr6:13378634], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More