EnhancerDB
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  3. rs55856997[chr13:111211828]
Enhancers that have rs55856997[chr13:111211828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111186805 111212195 enh15501
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs55856997[chr13:111211828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111211298 111212506 TEF1 GTRD no Bone (Osteoblast) 21605324
chr13 111211298 111212506 TEF1 GTRD no Bone (Osteoblast) 108089811
chr13 111211661 111212157 ZNF274 GTRD no Bone Marrow (K562) 108089812
chr13 111211680 111212268 ZBTB33 GTRD no Lung (A549) 108089813
chr13 111211718 111212242 ZNF274 GTRD no Bone Marrow (K562) 108089814
chr13 111211721 111212219 ZNF274 GTRD no Cervix (HeLa-S3) 21605325
chr13 111211721 111212219 ZNF274 GTRD no Cervix (HeLa-S3) 108089815
chr13 111211750 111212040 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21605326
chr13 111211750 111212040 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108089816
chr13 111211759 111212039 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21605327
chr13 111211759 111212039 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108089817
chr13 111211759 111212138 ZNF143 GTRD no Epithelial (MCF-7) 21605328
chr13 111211759 111212138 ZNF143 GTRD no Epithelial (MCF-7) 108089818
chr13 111211764 111212045 ZNF274 GTRD no Liver (HepG2) 21605329
chr13 111211764 111212045 ZNF274 GTRD no Liver (HepG2) 108089819
chr13 111211770 111212113 ZNF274 GTRD no Liver (HepG2) 21605330
chr13 111211770 111212113 ZNF274 GTRD no Liver (HepG2) 108089820
chr13 111211782 111212151 ZNF274 GTRD no Liver (HepG2) 21605331
chr13 111211782 111212151 ZNF274 GTRD no Liver (HepG2) 108089821
chr13 111211822 111211832 SREBF1 JASPAR yes 60359966
chr13 111211822 111211832 SREBF2 JASPAR yes 60359967
chr13 111211823 111211838 HNF4G JASPAR yes 60359968
chr13 111211824 111211839 HNF4A JASPAR yes 60359969
chr13 111211824 111211839 RUNX2 JASPAR yes 60359970
Genes associated with rs55856997[chr13:111211828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More