EnhancerDB
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  3. rs558589620[chr17:48717700]
Enhancers that have rs558589620[chr17:48717700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48713385 48720742 enh17222
Astrocyte Adrenal Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Muscle (A673)
Transcript factors that have rs558589620[chr17:48717700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48716754 48718836 AR GTRD no Prostate (PC-3) 21769879
chr17 48716754 48718836 AR GTRD no Prostate (PC-3) 108271045
chr17 48717696 48717705 PITX3 JASPAR yes 54710013
chr17 48717696 48717706 GSC2 JASPAR yes 54710014
chr17 48717696 48717706 GSC JASPAR yes 54710015
chr17 48717697 48717705 OTX1 JASPAR yes 54710016
Genes associated with rs558589620[chr17:48717700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More