EnhancerDB
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  3. rs55862304[chr1:200989775]
Enhancers that have rs55862304[chr1:200989775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200981245 200991765 enh12515
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Lung (A549) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs55862304[chr1:200989775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200987964 200991849 ZNF143 GTRD no Epithelial (MCF-7) 107855846
chr1 200989179 200992906 ZNF143 GTRD no Epithelial (MCF-7) 107855847
chr1 200989245 200990824 ZNF143 GTRD no Epithelial (MCF-7) 107855848
chr1 200989343 200991781 ZNF143 GTRD no Epithelial (MCF-7) 107855849
chr1 200989410 200990448 ZNF274 GTRD no Bone Marrow (K562) 21363769
chr1 200989410 200990448 ZNF274 GTRD no Bone Marrow (K562) 107855850
chr1 200989625 200991847 ZNF143 GTRD no Epithelial (MCF-7) 107855851
chr1 200989643 200990497 TCF7L2 GTRD no Colon (HCT116) 107855852
chr1 200989762 200990414 TCF7L2 GTRD no Colon (HCT116) 107855853
chr1 200989771 200989775 H4TF2 TRANSFAC yes 34478587
Genes associated with rs55862304[chr1:200989775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More