EnhancerDB
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  3. rs55863424[chr12:47660566]
Enhancers that have rs55863424[chr12:47660566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47659234 47678378 enh2316
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55863424[chr12:47660566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47660175 47660590 ZNF143 GTRD no Epithelial (MCF-7) 21543139
chr12 47660182 47660706 ZNF143 GTRD no Epithelial (MCF-7) 21543140
chr12 47660383 47660718 ZNF143 GTRD no Epithelial (MCF-7) 21543141
chr12 47660560 47660575 MEF2A JASPAR yes 120689545
chr12 47660562 47660574 MEF2A JASPAR yes 120689546
chr12 47660562 47660574 MEF2B JASPAR yes 120689547
chr12 47660562 47660574 MEF2D JASPAR yes 120689548
chr12 47660563 47660573 MEF2A JASPAR yes 120689549
chr12 47660564 47660572 FOXL1 JASPAR yes 120689550
chr12 47660564 47660575 FOXB1 JASPAR yes 120689551
chr12 47660565 47660576 FOXB1 JASPAR yes 120689552
chr12 47660566 47660574 FOXL1 JASPAR yes 120689553
chr12 47660566 47660577 FOXB1 JASPAR yes 120689554
Genes associated with rs55863424[chr12:47660566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More