EnhancerDB
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  3. rs55864143[chr16:88279968]
Enhancers that have rs55864143[chr16:88279968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs55864143[chr16:88279968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88278356 88283448 ZNF143 GTRD no Epithelial (MCF-7) 21735620
chr16 88278561 88281077 ZNF143 GTRD no Epithelial (MCF-7) 21735621
chr16 88279957 88279968 TBX2 JASPAR yes 12270678
chr16 88279957 88279970 EOMES JASPAR yes 12270679
chr16 88279958 88279968 TBR1 JASPAR yes 12270685
chr16 88279961 88279975 GATA2 JASPAR yes 12270686
chr16 88279963 88279969 GATA1 TRANSFAC yes 12270687
Genes associated with rs55864143[chr16:88279968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More