EnhancerDB
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  3. rs558679062[chr12:96590198]
Enhancers that have rs558679062[chr12:96590198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558679062[chr12:96590198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96590178 96590198 RREB1 JASPAR yes 123045563
chr12 96590183 96590203 RREB1 JASPAR yes 123045564
chr12 96590186 96590206 RREB1 JASPAR yes 123045565
chr12 96590188 96590208 RREB1 JASPAR yes 123045566
chr12 96590189 96590209 RREB1 JASPAR yes 123045567
chr12 96590190 96590210 RREB1 JASPAR yes 123045568
chr12 96590191 96590201 ZNF740 JASPAR yes 123045569
chr12 96590192 96590212 RREB1 JASPAR yes 123045570
chr12 96590193 96590203 SP1 JASPAR yes 123045571
chr12 96590193 96590214 ZNF263 JASPAR yes 123045572
chr12 96590194 96590214 RREB1 JASPAR yes 123045573
chr12 96590196 96590201 SP1 TRANSFAC yes 123045574
chr12 96590196 96590206 ZNF740 JASPAR yes 123045575
chr12 96590197 96590207 SP1 JASPAR yes 123045576
chr12 96590197 96590207 ZNF740 JASPAR yes 123045577
chr12 96590198 96590208 SP1 JASPAR yes 123045578
chr12 96590198 96590208 ZNF740 JASPAR yes 123045579
Genes associated with rs558679062[chr12:96590198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More