EnhancerDB
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  3. rs558697712[chr1:201999377]
Enhancers that have rs558697712[chr1:201999377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs558697712[chr1:201999377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201998751 201999401 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365455
chr1 201999254 202000504 ZNF274 GTRD no Cervix (HeLa-S3) 21365456
chr1 201999256 202000428 ZNF143 GTRD no Epithelial (MCF-7) 21365457
chr1 201999374 201999388 PLAG1 JASPAR yes 34543424
Genes associated with rs558697712[chr1:201999377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More