EnhancerDB
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  3. rs558780801[chr1:200259739]
Enhancers that have rs558780801[chr1:200259739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs558780801[chr1:200259739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200258197 200259776 ZNF143 GTRD no Epithelial (MCF-7) 21362764
chr1 200259258 200259757 ZNF274 GTRD no Liver (HepG2) 21362782
chr1 200259286 200259942 ZNF274 GTRD no Liver (HepG2) 21362783
chr1 200259334 200259954 ZNF274 GTRD no Liver (HepG2) 21362784
chr1 200259527 200259757 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362786
chr1 200259536 200259806 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362787
chr1 200259547 200259771 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21362788
chr1 200259551 200259741 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21362789
chr1 200259557 200259747 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21362790
chr1 200259728 200259739 TBX20 JASPAR yes 34429913
chr1 200259728 200259739 TBX2 JASPAR yes 34429914
chr1 200259728 200259741 EOMES JASPAR yes 34429915
chr1 200259729 200259739 TBR1 JASPAR yes 34429917
Genes associated with rs558780801[chr1:200259739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More