EnhancerDB
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  3. rs558789966[chr19:4088202]
Enhancers that have rs558789966[chr19:4088202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4075065 4088655 enh4968
Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Lung Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Thymus Epithelial (MCF-7)
chr19 4088191 4088358 vista28338
VISTA
Transcript factors that have rs558789966[chr19:4088202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4086960 4090768 ZNF274 GTRD no Blood (GM12878) 108370678
chr19 4086960 4090768 ZNF274 GTRD no Blood (GM12878) 108370679
chr19 4086960 4090768 ZNF274 GTRD no Blood (GM12878) 108370680
chr19 4087348 4090334 ZNF274 GTRD no Blood (GM12878) 108370681
chr19 4087348 4090334 ZNF274 GTRD no Blood (GM12878) 108370682
chr19 4087348 4090334 ZNF274 GTRD no Blood (GM12878) 108370683
chr19 4087408 4088722 ZBTB33 GTRD no Lung (A549) 108370684
chr19 4087409 4090197 ZNF274 GTRD no Blood (GM12878) 108370685
chr19 4087409 4090197 ZNF274 GTRD no Blood (GM12878) 108370686
chr19 4087409 4090197 ZNF274 GTRD no Blood (GM12878) 108370687
chr19 4087551 4088643 ZNF274 GTRD no Cervix (HeLa-S3) 108370688
chr19 4087817 4090060 ZNF274 GTRD no Blood (GM12878) 108370689
chr19 4087817 4090060 ZNF274 GTRD no Blood (GM12878) 108370690
chr19 4087817 4090060 ZNF274 GTRD no Blood (GM12878) 108370691
chr19 4087837 4088771 TCF7L2 GTRD no Colon (HCT116) 108370692
chr19 4087891 4088797 ZNF274 GTRD no Blood (GM12878) 108370693
chr19 4087918 4088775 ZNF274 GTRD no Blood (GM12878) 108370694
chr19 4087934 4088726 ZNF274 GTRD no Liver (HepG2) 108370695
chr19 4087963 4088674 TCF7L2 GTRD no Colon (HCT116) 108370696
chr19 4088014 4088805 TCF7L2 GTRD no Colon (HCT116) 108370697
chr19 4088016 4088688 ZNF274 GTRD no Blood (GM12878) 108370698
chr19 4088024 4088477 ZNF274 GTRD no Blood (GM12878) 108370699
chr19 4088041 4088418 ZNF274 GTRD no Blood (GM12878) 108370700
chr19 4088074 4088480 ZNF274 GTRD no Bone Marrow (K562) 108370701
chr19 4088078 4088499 ZNF274 GTRD no Bone Marrow (K562) 108370702
chr19 4088197 4088202 SP1 TRANSFAC yes 70789656
chr19 4088197 4088202 SP1 TRANSFAC yes 112161141
chr19 4088198 4088662 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108370703
chr19 4088202 4088212 SP1 JASPAR yes 70789657
chr19 4088202 4088212 SP1 JASPAR yes 112161142
Genes associated with rs558789966[chr19:4088202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More