EnhancerDB
  1. Home
  2. SNP
  3. rs558850334[chr1:12219961]
Enhancers that have rs558850334[chr1:12219961]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12196945 12220680 enh11507
Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs558850334[chr1:12219961]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12219948 12219963 MEF2C JASPAR yes 26805156
chr1 12219950 12219970 RREB1 JASPAR yes 26805157
chr1 12219956 12219968 INSM1 JASPAR yes 26805159
chr1 12219956 12219976 RREB1 JASPAR yes 26805160
chr1 12219960 12219980 RREB1 JASPAR yes 26805161
chr1 12219961 12219968 SP1 TRANSFAC yes 26805162
chr1 12219961 12219971 SP1 JASPAR yes 26805163
chr1 12219961 12219982 ZNF263 JASPAR yes 26805164
Genes associated with rs558850334[chr1:12219961], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More