EnhancerDB
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  3. rs558873616[chr19:7474837]
Enhancers that have rs558873616[chr19:7474837]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7469445 7495915 enh17893
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs558873616[chr19:7474837]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7474831 7474852 IRF1 JASPAR yes 112324869
chr19 7474832 7474847 FOXP1 JASPAR yes 112324870
chr19 7474832 7474853 IRF1 JASPAR yes 112324871
chr19 7474833 7474854 IRF1 JASPAR yes 112324872
chr19 7474834 7474855 IRF1 JASPAR yes 112324873
chr19 7474835 7474839 YY1 TRANSFAC yes 112324874
chr19 7474835 7474856 IRF1 JASPAR yes 112324875
chr19 7474836 7474851 FOXP1 JASPAR yes 112324876
chr19 7474837 7474852 FOXP1 JASPAR yes 112324877
Genes associated with rs558873616[chr19:7474837], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More