EnhancerDB
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  3. rs55888098[chr1:117103833]
Enhancers that have rs55888098[chr1:117103833]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117093904 117107375 enh27099
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs55888098[chr1:117103833]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117103066 117103888 POLR2A UCSC Txn Factor no Conserved 107824661
chr1 117103460 117103840 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333509
chr1 117103460 117103840 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824677
chr1 117103829 117103844 MEF2A JASPAR yes 31820242
chr1 117103830 117103845 MEF2C JASPAR yes 31820243
chr1 117103832 117103842 MEF2A JASPAR yes 31820244
chr1 117103833 117103837 YY1 TRANSFAC yes 31820245
Genes associated with rs55888098[chr1:117103833], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 117653682 117665209 - TRIM45 ENSG00000134253.5 117665209 549849 Liver 0.292096 1068