EnhancerDB
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  3. rs558882832[chr2:39326562]
Enhancers that have rs558882832[chr2:39326562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs558882832[chr2:39326562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39326553 39326563 PAX7 JASPAR yes 73181810
chr2 39326558 39326573 HNF1A JASPAR yes 73181811
chr2 39326559 39326572 HNF1B JASPAR yes 73181812
chr2 39326560 39326569 VENTX JASPAR yes 73181813
chr2 39326560 39326572 HNF1B JASPAR yes 73181814
Genes associated with rs558882832[chr2:39326562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More