EnhancerDB
  1. Home
  2. SNP
  3. rs558912199[chr6:110829088]
Enhancers that have rs558912199[chr6:110829088]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110824225 110836455 enh23505
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs558912199[chr6:110829088]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110829078 110829099 IRF1 JASPAR yes 104291009
chr6 110829082 110829103 IRF1 JASPAR yes 104291011
chr6 110829083 110829098 FOXP1 JASPAR yes 104291012
chr6 110829083 110829104 IRF1 JASPAR yes 104291013
chr6 110829084 110829105 IRF1 JASPAR yes 104291014
chr6 110829085 110829100 FOXP1 JASPAR yes 104291015
chr6 110829085 110829106 IRF1 JASPAR yes 104291016
chr6 110829086 110829107 IRF1 JASPAR yes 104291017
chr6 110829087 110829102 FOXP1 JASPAR yes 104291018
chr6 110829087 110829108 IRF1 JASPAR yes 104291019
chr6 110829088 110829103 FOXP1 JASPAR yes 104291020
chr6 110829088 110829109 IRF1 JASPAR yes 104291021
Genes associated with rs558912199[chr6:110829088], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More