EnhancerDB
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  3. rs559050588[chr1:12231233]
Enhancers that have rs559050588[chr1:12231233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12228245 12248275 enh11508
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Pancreas Uterus Thymus Heart
Transcript factors that have rs559050588[chr1:12231233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12228999 12231813 ZNF274 GTRD no Bone Marrow (K562) 107802102
chr1 12230976 12232962 P63 GTRD no Skin (Keratinocyte) 107802103
chr1 12231221 12231242 IRF1 JASPAR yes 26805640
chr1 12231222 12231243 IRF1 JASPAR yes 26805641
chr1 12231223 12231238 PRDM1 JASPAR yes 26805642
chr1 12231226 12231240 SPIC JASPAR yes 26805643
chr1 12231227 12231248 IRF1 JASPAR yes 26805644
chr1 12231228 12231249 IRF1 JASPAR yes 26805645
chr1 12231229 12231234 ETS2 TRANSFAC yes 26805646
chr1 12231229 12231250 IRF1 JASPAR yes 26805647
chr1 12231231 12231246 FOXP1 JASPAR yes 26805648
chr1 12231232 12231247 FOXP1 JASPAR yes 26805649
chr1 12231233 12231248 FOXP1 JASPAR yes 26805650
Genes associated with rs559050588[chr1:12231233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More