EnhancerDB
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  3. rs559121405[chr17:78839497]
Enhancers that have rs559121405[chr17:78839497]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs559121405[chr17:78839497]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78839495 78839505 HOXA2 JASPAR yes 56287193
chr17 78839495 78839505 MEOX1 JASPAR yes 56287194
chr17 78839496 78839509 DUXA JASPAR yes 56287195
chr17 78839497 78839508 PHOX2A JASPAR yes 56287196
chr17 78839497 78839508 PROP1 JASPAR yes 56287197
Genes associated with rs559121405[chr17:78839497], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More