EnhancerDB
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  3. rs55913294[chr12:48223554]
Enhancers that have rs55913294[chr12:48223554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48214553 48225280 enh14688
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs55913294[chr12:48223554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48223542 48223562 TP63 JASPAR yes 120720658
chr12 48223550 48223558 TBX5 JASPAR yes 120720659
chr12 48223550 48223559 ZEB1 JASPAR yes 120720660
chr12 48223550 48223565 SCRT1 JASPAR yes 120720661
chr12 48223551 48223561 FIGLA JASPAR yes 120720662
chr12 48223551 48223561 ID4 JASPAR yes 120720663
chr12 48223551 48223561 TCF3 JASPAR yes 120720664
chr12 48223551 48223561 TCF4 JASPAR yes 120720665
chr12 48223552 48223561 SNAI2 JASPAR yes 120720666
chr12 48223553 48223558 USF2 TRANSFAC yes 120720667
Genes associated with rs55913294[chr12:48223554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More