EnhancerDB
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  3. rs55919036[chr12:104251423]
Enhancers that have rs55919036[chr12:104251423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104248960 104266595 enh14936
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs55919036[chr12:104251423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104251410 104251423 SCRT2 JASPAR yes 123342695
chr12 104251410 104251425 SCRT1 JASPAR yes 123342696
chr12 104251414 104251423 SNAI2 JASPAR yes 123342697
chr12 104251414 104251424 ID4 JASPAR yes 123342698
chr12 104251414 104251424 NHLH1 JASPAR yes 123342699
chr12 104251414 104251424 TCF3 JASPAR yes 123342700
chr12 104251414 104251424 TCF4 JASPAR yes 123342701
chr12 104251416 104251425 ZEB1 JASPAR yes 123342702
chr12 104251416 104251426 TBX21 JASPAR yes 123342703
chr12 104251417 104251425 TBX15 JASPAR yes 123342704
chr12 104251417 104251425 TBX4 JASPAR yes 123342705
chr12 104251417 104251427 TBR1 JASPAR yes 123342706
Genes associated with rs55919036[chr12:104251423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More