EnhancerDB
  1. Home
  2. SNP
  3. rs559190827[chr1:178123288]
Enhancers that have rs559190827[chr1:178123288]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178110905 178126935 enh12409
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs559190827[chr1:178123288]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178123271 178123292 IRF1 JASPAR yes 33398458
chr1 178123272 178123293 IRF1 JASPAR yes 33398459
chr1 178123276 178123291 FOXP1 JASPAR yes 33398460
chr1 178123276 178123297 IRF1 JASPAR yes 33398461
chr1 178123277 178123292 FOXP1 JASPAR yes 33398462
chr1 178123277 178123298 IRF1 JASPAR yes 33398463
chr1 178123278 178123293 FOXP1 JASPAR yes 33398464
chr1 178123279 178123294 FOXP1 JASPAR yes 33398465
chr1 178123280 178123295 FOXP1 JASPAR yes 33398466
chr1 178123281 178123296 FOXP1 JASPAR yes 33398467
chr1 178123283 178123298 FOXP1 JASPAR yes 33398468
chr1 178123285 178123300 FOXP1 JASPAR yes 33398469
chr1 178123288 178123298 HOXD13 JASPAR yes 33398470
chr1 178123288 178123299 HOXA10 JASPAR yes 33398471
Genes associated with rs559190827[chr1:178123288], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More