EnhancerDB
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  3. rs559204416[chr1:203233235]
Enhancers that have rs559204416[chr1:203233235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203230551 203240576 enh880
Skin (Keratinocyte) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus Thymus
chr1 203233201 203233506 vista4622
VISTA
Transcript factors that have rs559204416[chr1:203233235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203233105 203233369 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107858328
chr1 203233234 203233246 PKNOX1 JASPAR yes 34611004
chr1 203233234 203233246 PKNOX2 JASPAR yes 34611005
chr1 203233234 203233246 TGIF1 JASPAR yes 34611006
chr1 203233234 203233246 TGIF2 JASPAR yes 34611007
chr1 203233234 203233246 PKNOX1 JASPAR yes 118434935
chr1 203233234 203233246 PKNOX2 JASPAR yes 118434936
chr1 203233234 203233246 TGIF1 JASPAR yes 118434937
chr1 203233234 203233246 TGIF2 JASPAR yes 118434938
Genes associated with rs559204416[chr1:203233235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More