EnhancerDB
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  3. rs559223397[chr1:6426490]
Enhancers that have rs559223397[chr1:6426490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 6411925 6440995 enh26
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach
Transcript factors that have rs559223397[chr1:6426490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 6426479 6426494 HNF1A JASPAR yes 26395160
chr1 6426489 6426495 TBP TRANSFAC yes 26395161
Genes associated with rs559223397[chr1:6426490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More