EnhancerDB
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  3. rs559294409[chr1:178117568]
Enhancers that have rs559294409[chr1:178117568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178110905 178126935 enh12409
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs559294409[chr1:178117568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178117565 178117580 FOXA1 JASPAR yes 33397465
chr1 178117566 178117578 FOXI1 JASPAR yes 33397466
chr1 178117566 178117580 POU4F1 JASPAR yes 33397467
chr1 178117566 178117581 HNF1A JASPAR yes 33397468
chr1 178117567 178117579 FOXC2 JASPAR yes 33397469
chr1 178117567 178117581 ONECUT3 JASPAR yes 33397470
chr1 178117568 178117579 FOXB1 JASPAR yes 33397471
chr1 178117568 178117579 FOXC1 JASPAR yes 33397472
chr1 178117568 178117579 PROP1 JASPAR yes 33397473
chr1 178117568 178117584 POU4F2 JASPAR yes 33397474
chr1 178117568 178117584 POU4F3 JASPAR yes 33397475
Genes associated with rs559294409[chr1:178117568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More