EnhancerDB
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  3. rs559329190[chr1:220904371]
Enhancers that have rs559329190[chr1:220904371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220903525 220910295 enh941
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Ovary Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs559329190[chr1:220904371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220904359 220904374 FOXP1 JASPAR yes 35505884
chr1 220904360 220904375 FOXP1 JASPAR yes 35505885
chr1 220904360 220904381 IRF1 JASPAR yes 35505886
chr1 220904361 220904376 FOXP1 JASPAR yes 35505887
chr1 220904363 220904378 FOXP1 JASPAR yes 35505888
chr1 220904364 220904385 IRF1 JASPAR yes 35505889
chr1 220904365 220904380 FOXP1 JASPAR yes 35505890
chr1 220904365 220904386 IRF1 JASPAR yes 35505891
chr1 220904369 220904390 IRF1 JASPAR yes 35505892
chr1 220904370 220904385 FOXP1 JASPAR yes 35505893
chr1 220904370 220904391 IRF1 JASPAR yes 35505894
Genes associated with rs559329190[chr1:220904371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More