EnhancerDB
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  3. rs559385498[chr1:233654848]
Enhancers that have rs559385498[chr1:233654848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 233652007 233661080 enh58228
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Colon (HCT116) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs559385498[chr1:233654848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 233653953 233657670 ZNF274 GTRD no Cervix (HeLa-S3) 21392442
chr1 233654175 233656067 TCF7L2 GTRD no Colon (HCT116) 21392446
chr1 233654215 233656521 AR GTRD no Prostate (PC-3) 21392450
chr1 233654322 233655991 ZNF274 GTRD no Cervix (HeLa-S3) 21392451
chr1 233654338 233655134 ZNF274 GTRD no Cervix (HeLa-S3) 21392452
chr1 233654355 233657292 ZNF274 GTRD no Cervix (HeLa-S3) 21392453
chr1 233654356 233655842 ZNF274 GTRD no Cervix (HeLa-S3) 21392454
chr1 233654358 233657191 ZNF274 GTRD no Cervix (HeLa-S3) 21392455
chr1 233654359 233655271 ZNF143 GTRD no Epithelial (MCF-7) 21392456
chr1 233654399 233655297 ZNF143 GTRD no Epithelial (MCF-7) 21392457
chr1 233654401 233655876 ZNF274 GTRD no Cervix (HeLa-S3) 21392458
chr1 233654414 233655792 ZNF274 GTRD no Cervix (HeLa-S3) 21392459
chr1 233654414 233655895 ZNF274 GTRD no Cervix (HeLa-S3) 21392460
chr1 233654418 233655074 ZNF143 GTRD no Epithelial (MCF-7) 21392461
chr1 233654431 233655141 ZNF274 GTRD no Cervix (HeLa-S3) 21392462
chr1 233654431 233655933 ZNF274 GTRD no Cervix (HeLa-S3) 21392463
chr1 233654442 233655250 ZNF143 GTRD no Epithelial (MCF-7) 21392464
chr1 233654447 233655885 TCF7L2 GTRD no Colon (HCT116) 21392465
chr1 233654480 233655186 ZNF274 GTRD no Cervix (HeLa-S3) 21392466
chr1 233654495 233655338 ZNF143 GTRD no Epithelial (MCF-7) 21392467
chr1 233654496 233655176 ZNF274 GTRD no Cervix (HeLa-S3) 21392468
chr1 233654498 233655356 ZNF143 GTRD no Epithelial (MCF-7) 21392469
chr1 233654501 233655145 ZNF143 GTRD no Epithelial (MCF-7) 21392470
chr1 233654510 233655829 ZNF274 GTRD no Cervix (HeLa-S3) 21392471
chr1 233654511 233655068 ZNF143 GTRD no Epithelial (MCF-7) 21392472
chr1 233654515 233655093 ZNF143 GTRD no Epithelial (MCF-7) 21392473
chr1 233654534 233655153 ZNF143 GTRD no Epithelial (MCF-7) 21392474
chr1 233654540 233655122 ZNF143 GTRD no Epithelial (MCF-7) 21392475
chr1 233654542 233655840 ZNF274 GTRD no Cervix (HeLa-S3) 21392476
chr1 233654545 233655067 ZNF143 GTRD no Epithelial (MCF-7) 21392477
chr1 233654551 233655079 TCF7L2 GTRD no Colon (HCT116) 21392478
chr1 233654552 233655978 ZNF274 GTRD no Cervix (HeLa-S3) 21392479
chr1 233654553 233655068 ZNF143 GTRD no Epithelial (MCF-7) 21392480
chr1 233654553 233655102 ZNF143 GTRD no Epithelial (MCF-7) 21392481
chr1 233654557 233655136 ZNF143 GTRD no Epithelial (MCF-7) 21392482
chr1 233654565 233655007 ZNF143 GTRD no Epithelial (MCF-7) 21392483
chr1 233654566 233655145 ZNF143 GTRD no Epithelial (MCF-7) 21392484
chr1 233654581 233655179 ZNF143 GTRD no Epithelial (MCF-7) 21392485
chr1 233654593 233655064 ZNF143 GTRD no Epithelial (MCF-7) 21392486
chr1 233654595 233655354 ZNF143 GTRD no Epithelial (MCF-7) 21392487
chr1 233654601 233655083 ZNF143 GTRD no Epithelial (MCF-7) 21392488
chr1 233654605 233654976 ZNF143 GTRD no Epithelial (MCF-7) 21392489
chr1 233654608 233655096 ZNF143 GTRD no Epithelial (MCF-7) 21392490
chr1 233654622 233655068 ZNF143 GTRD no Epithelial (MCF-7) 21392491
chr1 233654634 233655038 ZNF143 GTRD no Epithelial (MCF-7) 21392492
chr1 233654635 233655086 ZNF143 GTRD no Epithelial (MCF-7) 21392493
chr1 233654638 233655126 ZNF143 GTRD no Epithelial (MCF-7) 21392494
chr1 233654643 233654976 ZNF143 GTRD no Epithelial (MCF-7) 21392495
chr1 233654668 233655673 TCF7L2 GTRD no Colon (HCT116) 21392496
chr1 233654692 233654948 ZNF143 GTRD no Epithelial (MCF-7) 21392497
chr1 233654718 233655054 TCF7L2 GTRD no Colon (HCT116) 21392498
chr1 233654741 233655120 ZNF143 GTRD no Epithelial (MCF-7) 21392499
chr1 233654792 233654974 SOX2 GTRD no Neural Stem Cells (H9) 21392500
chr1 233654848 233654858 SREBF2 JASPAR yes 36227841
Genes associated with rs559385498[chr1:233654848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More