EnhancerDB
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  3. rs559392020[chr1:27437720]
Enhancers that have rs559392020[chr1:27437720]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27433689 27453155 enh170
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559392020[chr1:27437720]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27437706 27437721 TFAP2A JASPAR yes 27677350
chr1 27437706 27437721 TFAP2C JASPAR yes 27677351
chr1 27437708 27437723 TFAP2A JASPAR yes 27677352
chr1 27437708 27437723 TFAP2C JASPAR yes 27677353
chr1 27437709 27437720 TFAP2A JASPAR yes 27677354
chr1 27437709 27437720 TFAP2B JASPAR yes 27677355
chr1 27437709 27437721 TFAP2A JASPAR yes 27677356
Genes associated with rs559392020[chr1:27437720], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More