EnhancerDB
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  3. rs559404019[chr1:202015842]
Enhancers that have rs559404019[chr1:202015842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs559404019[chr1:202015842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202014763 202020119 ZBTB33 GTRD no Lung (A549) 107857531
chr1 202014791 202021226 ZBTB33 GTRD no Lung (A549) 107857532
chr1 202014792 202019513 ZBTB33 GTRD no Lung (A549) 107857533
chr1 202014810 202019522 ZBTB33 GTRD no Lung (A549) 107857534
chr1 202014811 202019498 ZBTB33 GTRD no Lung (A549) 107857535
chr1 202014820 202019524 ZBTB33 GTRD no Lung (A549) 107857536
chr1 202014830 202016614 ZBTB33 GTRD no Lung (A549) 107857537
chr1 202014841 202019498 ZBTB33 GTRD no Lung (A549) 107857538
chr1 202014863 202020026 ZBTB33 GTRD no Lung (A549) 107857539
chr1 202015048 202015876 TCF7L2 GTRD no Colon (HCT116) 21365783
chr1 202015152 202019509 ZBTB33 GTRD no Lung (A549) 107857540
chr1 202015327 202015897 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21365785
chr1 202015381 202019529 ZBTB33 GTRD no Lung (A549) 107857541
chr1 202015407 202015903 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21365790
chr1 202015415 202019526 ZBTB33 GTRD no Lung (A549) 107857542
chr1 202015533 202019697 ZBTB33 GTRD no Lung (A549) 107857543
chr1 202015614 202016304 TCF7L2 GTRD no Colon (HCT116) 21365796
chr1 202015614 202016304 TCF7L2 GTRD no Colon (HCT116) 107857544
chr1 202015721 202016477 ZNF143 GTRD no Epithelial (MCF-7) 21365798
chr1 202015721 202016477 ZNF143 GTRD no Epithelial (MCF-7) 107857545
chr1 202015747 202016689 ZNF274 GTRD no Liver (HepG2) 21365799
chr1 202015747 202016689 ZNF274 GTRD no Liver (HepG2) 107857546
chr1 202015806 202016706 P63 GTRD no Skin (Keratinocyte) 107857547
chr1 202015832 202015847 STAT1 JASPAR yes 34546215
chr1 202015834 202015845 STAT1 JASPAR yes 34546216
chr1 202015834 202015845 STAT3 JASPAR yes 34546217
Genes associated with rs559404019[chr1:202015842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More