EnhancerDB
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  3. rs559405894[chr12:109167875]
Enhancers that have rs559405894[chr12:109167875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109156825 109170435 enh14976
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs559405894[chr12:109167875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109167501 109168117 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571753
chr12 109167501 109168117 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057635
chr12 109167531 109167921 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571754
chr12 109167531 109167921 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057636
chr12 109167549 109167885 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571755
chr12 109167549 109167885 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057637
chr12 109167590 109167894 NR3C1 UCSC Txn Factor no Conserved 108057638
chr12 109167610 109167894 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108057639
chr12 109167634 109167970 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571756
chr12 109167634 109167970 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057640
chr12 109167645 109167919 CEBPB UCSC Txn Factor no Conserved 108057641
chr12 109167650 109167990 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571757
chr12 109167650 109167990 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057642
chr12 109167651 109168169 TCF7L2 GTRD no Colon (HCT116) 108057643
chr12 109167664 109167940 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571758
chr12 109167664 109167940 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057644
chr12 109167677 109168197 ZNF143 GTRD no Epithelial (MCF-7) 108057645
chr12 109167684 109167964 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571759
chr12 109167684 109167964 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057646
chr12 109167686 109168022 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571760
chr12 109167686 109168022 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057647
chr12 109167689 109168233 ZNF274 GTRD no Bone Marrow (K562) 108057649
chr12 109167692 109167982 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571762
chr12 109167692 109167982 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057650
chr12 109167694 109167984 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571763
chr12 109167694 109167984 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057651
chr12 109167695 109167919 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571764
chr12 109167695 109167919 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057652
chr12 109167696 109167956 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571765
chr12 109167696 109167956 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057653
chr12 109167713 109168193 TCF7L2 GTRD no Colon (HCT116) 108057654
chr12 109167750 109167904 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571766
chr12 109167750 109167904 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057655
chr12 109167870 109167887 RARA JASPAR yes 123621394
chr12 109167871 109167890 CTCF JASPAR yes 123621395
Genes associated with rs559405894[chr12:109167875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More