EnhancerDB
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  3. rs559407185[chr1:220468674]
Enhancers that have rs559407185[chr1:220468674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220466225 220478595 enh12679
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs559407185[chr1:220468674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220468446 220468684 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21381597
chr1 220468659 220468674 FOXP1 JASPAR yes 35482063
chr1 220468660 220468674 ONECUT2 JASPAR yes 35482065
chr1 220468660 220468674 ONECUT3 JASPAR yes 35482066
chr1 220468662 220468683 IRF1 JASPAR yes 35482070
chr1 220468663 220468678 FOXP1 JASPAR yes 35482071
chr1 220468663 220468684 IRF1 JASPAR yes 35482072
chr1 220468664 220468676 FOXC2 JASPAR yes 35482073
chr1 220468667 220468682 FOXP1 JASPAR yes 35482075
chr1 220468668 220468683 FOXP1 JASPAR yes 35482076
chr1 220468668 220468689 IRF1 JASPAR yes 35482077
chr1 220468669 220468684 FOXP1 JASPAR yes 35482078
chr1 220468669 220468684 MEF2C JASPAR yes 35482079
chr1 220468669 220468690 IRF1 JASPAR yes 35482080
chr1 220468671 220468686 FOXP1 JASPAR yes 35482081
Genes associated with rs559407185[chr1:220468674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More