EnhancerDB
  1. Home
  2. SNP
  3. rs559416808[chr16:88301316]
Enhancers that have rs559416808[chr16:88301316]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs559416808[chr16:88301316]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88301047 88302401 TCF7L2 GTRD no Colon (HCT116) 21735719
chr16 88301305 88301320 SCRT1 JASPAR yes 12272214
chr16 88301305 88302305 TCF7L2 GTRD no Colon (HCT116) 21735720
chr16 88301306 88301316 FIGLA JASPAR yes 12272215
chr16 88301306 88301316 ID4 JASPAR yes 12272216
chr16 88301306 88301316 TCF3 JASPAR yes 12272217
chr16 88301306 88301316 TCF4 JASPAR yes 12272218
chr16 88301307 88301316 SNAI2 JASPAR yes 12272219
chr16 88301307 88301320 SCRT2 JASPAR yes 12272220
Genes associated with rs559416808[chr16:88301316], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More