EnhancerDB
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  3. rs559457938[chr17:76931346]
Enhancers that have rs559457938[chr17:76931346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559457938[chr17:76931346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76931344 76931353 ZEB1 JASPAR yes 56190332
chr17 76931345 76931355 ID4 JASPAR yes 56190333
chr17 76931345 76931355 NHLH1 JASPAR yes 56190334
chr17 76931345 76931355 TCF3 JASPAR yes 56190335
chr17 76931345 76931355 TCF4 JASPAR yes 56190336
chr17 76931346 76931355 SNAI2 JASPAR yes 56190337
Genes associated with rs559457938[chr17:76931346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More