EnhancerDB
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  3. rs55947040[chr10:24993394]
Enhancers that have rs55947040[chr10:24993394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 24978186 24994875 enh13065
Prostate (PC-3) Bone (Osteoblast) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Stomach
chr10 24993053 24993414 vista6821
VISTA
Transcript factors that have rs55947040[chr10:24993394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 24992811 24993985 TEF1 GTRD no Bone (Osteoblast) 21422301
chr10 24992811 24993985 TEF1 GTRD no Bone (Osteoblast) 107904377
chr10 24993282 24993714 ZNF274 GTRD no Cervix (HeLa-S3) 107904378
chr10 24993313 24993950 ZNF274 GTRD no Bone Marrow (K562) 107904379
chr10 24993381 24993592 ZNF274 GTRD no Liver (HepG2) 107904380
chr10 24993382 24993403 IRF1 JASPAR yes 21061350
chr10 24993382 24993403 IRF1 JASPAR yes 126091123
chr10 24993388 24993409 IRF1 JASPAR yes 21061352
chr10 24993388 24993409 IRF1 JASPAR yes 126091125
chr10 24993389 24993404 FOXP1 JASPAR yes 21061353
chr10 24993389 24993404 FOXP1 JASPAR yes 126091126
chr10 24993389 24993410 IRF1 JASPAR yes 21061354
chr10 24993389 24993410 IRF1 JASPAR yes 126091127
chr10 24993390 24993411 IRF1 JASPAR yes 21061355
chr10 24993390 24993411 IRF1 JASPAR yes 126091128
chr10 24993392 24993396 YY1 TRANSFAC yes 21061356
chr10 24993392 24993396 YY1 TRANSFAC yes 126091129
chr10 24993394 24993409 FOXP1 JASPAR yes 21061357
chr10 24993394 24993409 FOXP1 JASPAR yes 126091130
Genes associated with rs55947040[chr10:24993394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More