EnhancerDB
  1. Home
  2. SNP
  3. rs55948442[chr12:96598556]
Enhancers that have rs55948442[chr12:96598556]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55948442[chr12:96598556]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96598550 96598560 TBX21 JASPAR yes 123046951
chr12 96598550 96598561 TBX20 JASPAR yes 123046952
chr12 96598550 96598561 TBX2 JASPAR yes 123046953
chr12 96598551 96598561 TBR1 JASPAR yes 123046954
Genes associated with rs55948442[chr12:96598556], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More