EnhancerDB
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  3. rs559487574[chr5:78268101]
Enhancers that have rs559487574[chr5:78268101]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78266085 78279675 enh55336
Prostate (PC-3) Liver (HepG2) Kidney Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs559487574[chr5:78268101]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78268090 78268101 STAT1 JASPAR yes 63636026
chr5 78268095 78268105 EN2 JASPAR yes 63636027
chr5 78268095 78268105 ESX1 JASPAR yes 63636028
chr5 78268095 78268105 GBX1 JASPAR yes 63636029
chr5 78268095 78268105 GBX2 JASPAR yes 63636030
chr5 78268095 78268105 HESX1 JASPAR yes 63636031
chr5 78268095 78268105 HOXA2 JASPAR yes 63636032
chr5 78268095 78268105 LBX2 JASPAR yes 63636033
chr5 78268095 78268105 LHX2 JASPAR yes 63636034
chr5 78268095 78268105 RAX JASPAR yes 63636035
chr5 78268096 78268104 BSX JASPAR yes 63636036
chr5 78268096 78268104 DLX6 JASPAR yes 63636037
chr5 78268096 78268104 MSX1 JASPAR yes 63636038
chr5 78268096 78268104 MSX2 JASPAR yes 63636039
Genes associated with rs559487574[chr5:78268101], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More