EnhancerDB
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  3. rs55949534[chr7:2143256]
Enhancers that have rs55949534[chr7:2143256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 2129984 2180255 enh9566
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55949534[chr7:2143256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 2143255 2143274 REST JASPAR yes 12513361
chr7 2143256 2143260 LFA1 TRANSFAC yes 12513362
Genes associated with rs55949534[chr7:2143256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More