EnhancerDB
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  3. rs559517944[chr1:180580062]
Enhancers that have rs559517944[chr1:180580062]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180576925 180587319 enh784
Bone Marrow (K562) Skin (Keratinocyte) Esophagus Astrocyte Liver Lung Placenta Adrenal Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs559517944[chr1:180580062]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180579431 180580315 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353990
chr1 180579535 180580712 ZNF143 GTRD no Epithelial (MCF-7) 107847941
chr1 180579548 180580098 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353993
chr1 180579589 180580165 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353994
chr1 180579592 180580082 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353995
chr1 180579636 180580076 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353998
chr1 180579648 180580104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354000
chr1 180579664 180580064 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354006
chr1 180579687 180580263 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354009
chr1 180579766 180580270 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354026
chr1 180579894 180580618 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354029
chr1 180579894 180580618 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107847942
chr1 180579933 180580903 ZNF143 GTRD no Epithelial (MCF-7) 107847943
chr1 180579962 180580850 ZNF143 GTRD no Epithelial (MCF-7) 107847944
chr1 180580002 180580526 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354030
chr1 180580026 180580530 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354031
chr1 180580028 180580696 ZNF143 GTRD no Epithelial (MCF-7) 107847945
chr1 180580034 180580698 ZNF143 GTRD no Epithelial (MCF-7) 107847946
Genes associated with rs559517944[chr1:180580062], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More