EnhancerDB
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  3. rs559535223[chr1:117106417]
Enhancers that have rs559535223[chr1:117106417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117093904 117107375 enh27099
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs559535223[chr1:117106417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117105596 117114442 ZNF274 GTRD no Blood (GM12878) 21333510
chr1 117105596 117114442 ZNF274 GTRD no Blood (GM12878) 107824678
chr1 117105596 117114442 ZNF274 GTRD no Blood (GM12878) 107824679
chr1 117105596 117114442 ZNF274 GTRD no Blood (GM12878) 107824680
chr1 117106405 117106418 TFAP2B JASPAR yes 31820588
chr1 117106406 117106420 PLAG1 JASPAR yes 31820589
chr1 117106412 117106427 TFAP2C JASPAR yes 31820590
Genes associated with rs559535223[chr1:117106417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More