EnhancerDB
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  3. rs55953671[chr11:12196107]
Enhancers that have rs55953671[chr11:12196107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12175905 12217435 enh13777
Bone Marrow (K562) Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs55953671[chr11:12196107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12195610 12197362 ZNF274 GTRD no Blood (GM12878) 21471512
chr11 12195610 12197362 ZNF274 GTRD no Blood (GM12878) 107958849
chr11 12196103 12196115 BHLHE23 JASPAR yes 37428663
chr11 12196104 12196114 BHLHE22 JASPAR yes 37428664
chr11 12196104 12196114 NEUROD2 JASPAR yes 37428665
chr11 12196104 12196114 OLIG1 JASPAR yes 37428666
chr11 12196104 12196114 OLIG2 JASPAR yes 37428667
chr11 12196104 12196114 OLIG3 JASPAR yes 37428668
Genes associated with rs55953671[chr11:12196107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More