EnhancerDB
  1. Home
  2. SNP
  3. rs55954490[chr1:236694662]
Enhancers that have rs55954490[chr1:236694662]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236692957 236700017 enh27642
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Blood (T-cell) Heart
Transcript factors that have rs55954490[chr1:236694662]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236694649 236694668 PAX5 JASPAR yes 36422518
Genes associated with rs55954490[chr1:236694662], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 236681300 236716281 + LGALS8 ENSG00000116977.14 236681300 0 Esophagus 1.52765e-05 1977
chr1 236681300 236716281 + LGALS8 ENSG00000116977.14 236681300 0 Stomach 0.002525 1977