EnhancerDB
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  3. rs559624739[chr1:40294390]
Enhancers that have rs559624739[chr1:40294390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs559624739[chr1:40294390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40294375 40294391 SOX8 JASPAR yes 28294443
chr1 40294384 40294395 PHOX2A JASPAR yes 28294444
chr1 40294384 40294395 PROP1 JASPAR yes 28294445
Genes associated with rs559624739[chr1:40294390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More