EnhancerDB
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  3. rs55962650[chr1:28680213]
Enhancers that have rs55962650[chr1:28680213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28664885 28683047 enh11681
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Stomach
Transcript factors that have rs55962650[chr1:28680213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28680201 28680216 FOXP1 JASPAR yes 27762312
chr1 28680202 28680217 MEF2A JASPAR yes 27762313
chr1 28680203 28680218 MEF2C JASPAR yes 27762314
Genes associated with rs55962650[chr1:28680213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More